GEO2Enrichr

Ma'ayan Lab

Hvad er GEO2Enrichr?

GEO2Enrichr er en Chrome-udvidelse udviklet af maayanlabapps, og dens hovedfunktion er "Ma'ayan Lab".

Udvidelsesskærmbilleder

screenshot

Download GEO2Enrichr-udvidelses-CRX-fil

Download GEO2Enrichr-udvidelsesfiler i crx-format, installer Chrome-udvidelser manuelt i browseren eller del crx-filer med venner for nemt at installere Chrome-udvidelser.

Brugsanvisning til Udvidelsen

                        Identification of differentially expressed genes is an important step in extracting knowledge from gene expression profiling studies. The raw expression data from microarray and other high-throughput technologies is deposited into the Gene Expression Omnibus (GEO) and served as Simple Omnibus Format in Text (SOFT) files. However, extracting and analyzing differentially expressed genes from GEO requires significant computational skills.

GEO2Enrichr is a browser extension that can be used to extract differentially expressed gene sets from GEO, and analyzing those sets with Enrichr through a user interface. GEO2Enrichr adds functionality to GEO web-pages where with one click, users can submit two groups of samples to our web-server. The server downloads the SOFT files, parses, cleans, and normalizes the data, identifies the differentially expressed genes, and then pipes the resulting gene lists to Enrichr for downstream functional analysis. GEO2Enrichr can help researchers to quickly explore hypotheses with no technical overhead, lowering the barrier of entry for biologists by automating data processing steps needed for knowledge extraction from the major repository GEO.                    

Grundlæggende oplysninger om udvidelsen

Navn GEO2Enrichr GEO2Enrichr
ID pcbdeobileclecleblcnadplfcicfjlp
Officiel URL https://chrome.google.com/webstore/detail/geo2enrichr/pcbdeobileclecleblcnadplfcicfjlp
Beskrivelse Ma'ayan Lab
Filstørrelse 155 KB
Antal Installationer 1,000
Nuværende Version 5.0
Senest Opdateret 2019-07-06
Udgivelsesdato 2019-07-06
Bedømmelse 5.00/5 Samlet 12 Bedømmelser
Udvikler maayanlabapps
E-mail [email protected]
Betalingsmetode free
Udvidelseswebsted https://amp.pharm.mssm.edu/g2e/
Understøttede Sprog en
manifest.json
{
    "update_url": "https:\/\/clients2.google.com\/service\/update2\/crx",
    "name": "GEO2Enrichr",
    "short_name": "g2e",
    "version": "5.0",
    "description": "Ma'ayan Lab",
    "icons": {
        "128": "logo-128x128.png"
    },
    "permissions": [
        "downloads",
        "https:\/\/amp.pharm.mssm.edu\/Enrichr\/"
    ],
    "background": {
        "scripts": [
            "g2e.background.js"
        ],
        "persistent": false
    },
    "content_scripts": [
        {
            "matches": [
                "https:\/\/www.ncbi.nlm.nih.gov\/sites\/*",
                "https:\/\/www.ncbi.nlm.nih.gov\/geo\/query\/acc.cgi*",
                "https:\/\/amp.pharm.mssm.edu\/gen3va\/*"
            ],
            "css": [
                "open-sans.css",
                "main.css",
                "jquery-ui.min.css"
            ],
            "js": [
                "jquery-1.11.2.min.js",
                "jquery-ui.min.js",
                "tag-it.min.js",
                "g2e.js"
            ]
        }
    ],
    "web_accessible_resources": [
        "\/*"
    ],
    "manifest_version": 2,
    "content_security_policy": "script-src 'self' https:\/\/ajax.googleapis.com; object-src 'self'"
}